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STRINGSTRING
GLYMA08G06560.1 protein (Glycine max) - STRING interaction network
"GLYMA08G06560.1" - RING-type E3 ubiquitin transferase in Glycine max
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLYMA08G06560.1RING-type E3 ubiquitin transferase (366 aa)    
Predicted Functional Partners:
GLYMA08G02780.1
Uncharacterized protein (926 aa)
           
  0.755
GLYMA08G14190.2
Uncharacterized protein (604 aa)
           
  0.720
GLYMA05G30980.1
Uncharacterized protein (604 aa)
           
  0.720
GLYMA15G07465.1
Uncharacterized protein (146 aa)
           
  0.716
GLYMA13G31840.1
Uncharacterized protein (168 aa)
           
  0.716
GLYMA15G07210.2
Uncharacterized protein (947 aa)
           
  0.689
GLYMA13G32110.2
Uncharacterized protein (948 aa)
           
  0.689
GLYMA08G06460.1
Uncharacterized protein (1047 aa)
           
  0.689
GLYMA07G30840.2
Uncharacterized protein (1030 aa)
           
  0.689
GLYMA15G07080.1
Uncharacterized protein (936 aa)
       
 
  0.573
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: G. max, Glycine max, Glycine max (L.) Merr., soybean, soybeans
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