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GLYMA08G09280.1 protein (Glycine max) - STRING interaction network
"GLYMA08G09280.1" - U6 small nuclear RNA in Glycine max
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLYMA08G09280.1U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; Belongs to the methyltransferase superfamily. METTL16/RlmF family (490 aa)    
Predicted Functional Partners:
GLYMA08G03980.1
Uncharacterized protein (276 aa)
     
 
  0.872
GLYMA19G02790.1
Uncharacterized protein (356 aa)
           
  0.729
GLYMA08G01670.2
Uncharacterized protein (340 aa)
     
   
  0.647
GLYMA05G37930.4
Uncharacterized protein (335 aa)
     
   
  0.647
GLYMA17G29710.1
Uncharacterized protein (285 aa)
           
  0.646
GLYMA14G17200.2
Uncharacterized protein (306 aa)
           
  0.646
GLYMA06G07940.1
Uncharacterized protein (239 aa)
           
  0.646
GLYMA04G07890.2
Uncharacterized protein (232 aa)
           
  0.646
GLYMA20G22630.1
Uncharacterized protein (221 aa)
   
     
  0.625
PIEF
Uncharacterized protein (2049 aa)
     
   
  0.618
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: G. max, Glycine max, Glycine max (L.) Merr., soybean, soybeans
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