I1L1X1_SOYBN protein (Glycine max) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

I1L1X1_SOYBN

Uncharacterized protein. (306 aa)

Predicted Functional Partners:

I1LCC3_SOYBN

0.926

I1NI24_SOYBN

0.926

A0A0R0H4V4

0.920

I1KEH3_SOYBN

0.920

K7KCC2_SOYBN

0.817

B0M1A9_SOYBN

0.794

I1KL36_SOYBN

0.794

I1NEH3_SOYBN

0.794

Q6TXD0_SOYBN

0.794

I1K0U5_SOYBN

0.784

Your Current Organism:

Glycine max

NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R0H4V4	B0M1A9_SOYBN	A0A0R0H4V4	B0M1A9	ETF domain-containing protein.	Peroxisomal 3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.	0.843
A0A0R0H4V4	I1K0U5_SOYBN	A0A0R0H4V4	I1K0U5	ETF domain-containing protein.	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	0.706
A0A0R0H4V4	I1KL36_SOYBN	A0A0R0H4V4	I1KL36	ETF domain-containing protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.843
A0A0R0H4V4	I1L1X1_SOYBN	A0A0R0H4V4	I1L1X1	ETF domain-containing protein.	Uncharacterized protein.	0.920
A0A0R0H4V4	I1LCC3_SOYBN	A0A0R0H4V4	I1LCC3	ETF domain-containing protein.	ETF domain-containing protein.	0.999
A0A0R0H4V4	I1NEH3_SOYBN	A0A0R0H4V4	I1NEH3	ETF domain-containing protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.843
A0A0R0H4V4	I1NI24_SOYBN	A0A0R0H4V4	I1NI24	ETF domain-containing protein.	ETF domain-containing protein.	0.999
A0A0R0H4V4	K7KCC2_SOYBN	A0A0R0H4V4	K7KCC2	ETF domain-containing protein.	Uncharacterized protein.	0.678
A0A0R0H4V4	Q6TXD0_SOYBN	A0A0R0H4V4	Q6TXD0	ETF domain-containing protein.	3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.	0.843
B0M1A9_SOYBN	A0A0R0H4V4	B0M1A9	A0A0R0H4V4	Peroxisomal 3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.	ETF domain-containing protein.	0.843
B0M1A9_SOYBN	I1K0U5_SOYBN	B0M1A9	I1K0U5	Peroxisomal 3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	0.869
B0M1A9_SOYBN	I1KEH3_SOYBN	B0M1A9	I1KEH3	Peroxisomal 3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.	ETF domain-containing protein.	0.843
B0M1A9_SOYBN	I1L1X1_SOYBN	B0M1A9	I1L1X1	Peroxisomal 3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein.	0.794
B0M1A9_SOYBN	I1LCC3_SOYBN	B0M1A9	I1LCC3	Peroxisomal 3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.	ETF domain-containing protein.	0.625
B0M1A9_SOYBN	I1NI24_SOYBN	B0M1A9	I1NI24	Peroxisomal 3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.	ETF domain-containing protein.	0.625
B0M1A9_SOYBN	K7KCC2_SOYBN	B0M1A9	K7KCC2	Peroxisomal 3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein.	0.552
I1K0U5_SOYBN	A0A0R0H4V4	I1K0U5	A0A0R0H4V4	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	ETF domain-containing protein.	0.706
I1K0U5_SOYBN	B0M1A9_SOYBN	I1K0U5	B0M1A9	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Peroxisomal 3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.	0.869
I1K0U5_SOYBN	I1KEH3_SOYBN	I1K0U5	I1KEH3	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	ETF domain-containing protein.	0.706
I1K0U5_SOYBN	I1KL36_SOYBN	I1K0U5	I1KL36	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.869