I1N6C3_SOYBN protein (Glycine max) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

I1N6C3_SOYBN

Uncharacterized protein. (476 aa)

Predicted Functional Partners:

K7KCC2_SOYBN

0.524

I1M703_SOYBN

0.433

I1KXY6_SOYBN

0.423

I1N108_SOYBN

0.420

A0A0R0J3A8

0.404

Your Current Organism:

Glycine max

NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R0J3A8	I1N6C3_SOYBN	A0A0R0J3A8	I1N6C3	Uncharacterized protein.	Uncharacterized protein.	0.404
I1KXY6_SOYBN	I1N6C3_SOYBN	I1KXY6	I1N6C3	Uncharacterized protein.	Uncharacterized protein.	0.423
I1M703_SOYBN	I1N6C3_SOYBN	I1M703	I1N6C3	Uncharacterized protein.	Uncharacterized protein.	0.433
I1N108_SOYBN	I1N6C3_SOYBN	I1N108	I1N6C3	Uncharacterized protein.	Uncharacterized protein.	0.420
I1N6C3_SOYBN	A0A0R0J3A8	I1N6C3	A0A0R0J3A8	Uncharacterized protein.	Uncharacterized protein.	0.404
I1N6C3_SOYBN	I1KXY6_SOYBN	I1N6C3	I1KXY6	Uncharacterized protein.	Uncharacterized protein.	0.423
I1N6C3_SOYBN	I1M703_SOYBN	I1N6C3	I1M703	Uncharacterized protein.	Uncharacterized protein.	0.433
I1N6C3_SOYBN	I1N108_SOYBN	I1N6C3	I1N108	Uncharacterized protein.	Uncharacterized protein.	0.420
I1N6C3_SOYBN	K7KCC2_SOYBN	I1N6C3	K7KCC2	Uncharacterized protein.	Uncharacterized protein.	0.524
K7KCC2_SOYBN	I1N6C3_SOYBN	K7KCC2	I1N6C3	Uncharacterized protein.	Uncharacterized protein.	0.524