K7M324_SOYBN protein (Glycine max) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

K7M324_SOYBN

Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (149 aa)

Predicted Functional Partners:

I1K2S3_SOYBN

0.997

A0A0R0I6D2

0.992

A0A0R0G9Z5

0.986

I1MRP4_SOYBN

0.986

I1JU90_SOYBN

0.982

K7KTF3_SOYBN

0.982

A0A0R0F6M5

0.964

I1JI72_SOYBN

0.964

C6SZ18_SOYBN

0.962

I1JQD4_SOYBN

0.962

Your Current Organism:

Glycine max

NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R0F6M5	A0A0R0G9Z5	A0A0R0F6M5	A0A0R0G9Z5	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	0.990
A0A0R0F6M5	A0A0R0I6D2	A0A0R0F6M5	A0A0R0I6D2	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Uncharacterized protein.	0.992
A0A0R0F6M5	C6SZ18_SOYBN	A0A0R0F6M5	C6SZ18	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Uncharacterized protein.	0.968
A0A0R0F6M5	I1JQD4_SOYBN	A0A0R0F6M5	I1JQD4	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Uncharacterized protein.	0.968
A0A0R0F6M5	I1JU90_SOYBN	A0A0R0F6M5	I1JU90	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Uncharacterized protein.	0.984
A0A0R0F6M5	I1K2S3_SOYBN	A0A0R0F6M5	I1K2S3	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.	0.997
A0A0R0F6M5	I1MRP4_SOYBN	A0A0R0F6M5	I1MRP4	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	0.990
A0A0R0F6M5	K7KTF3_SOYBN	A0A0R0F6M5	K7KTF3	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Uncharacterized protein.	0.984
A0A0R0F6M5	K7M324_SOYBN	A0A0R0F6M5	K7M324	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.964
A0A0R0G9Z5	A0A0R0F6M5	A0A0R0G9Z5	A0A0R0F6M5	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.990
A0A0R0G9Z5	A0A0R0I6D2	A0A0R0G9Z5	A0A0R0I6D2	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	Uncharacterized protein.	0.999
A0A0R0G9Z5	C6SZ18_SOYBN	A0A0R0G9Z5	C6SZ18	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	Uncharacterized protein.	0.998
A0A0R0G9Z5	I1JI72_SOYBN	A0A0R0G9Z5	I1JI72	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	Uncharacterized protein.	0.990
A0A0R0G9Z5	I1JQD4_SOYBN	A0A0R0G9Z5	I1JQD4	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	Uncharacterized protein.	0.998
A0A0R0G9Z5	I1JU90_SOYBN	A0A0R0G9Z5	I1JU90	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	Uncharacterized protein.	0.999
A0A0R0G9Z5	I1K2S3_SOYBN	A0A0R0G9Z5	I1K2S3	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.	0.999
A0A0R0G9Z5	K7KTF3_SOYBN	A0A0R0G9Z5	K7KTF3	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	Uncharacterized protein.	0.999
A0A0R0G9Z5	K7M324_SOYBN	A0A0R0G9Z5	K7M324	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.986
A0A0R0I6D2	A0A0R0F6M5	A0A0R0I6D2	A0A0R0F6M5	Uncharacterized protein.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.992
A0A0R0I6D2	A0A0R0G9Z5	A0A0R0I6D2	A0A0R0G9Z5	Uncharacterized protein.	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	0.999