STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q91_0447Protocatechuate (4-hydroxybenzoaat) transmembrane transporter; Permease of the major facilitator superfamily. (442 aa)    
Predicted Functional Partners:
Q91_0446
Hypothetical protein.
       0.773
Q91_0448
Heat shock protein Hsp20; Belongs to the small heat shock protein (HSP20) family.
       0.594
greB
Transcription elongation factor greb protein; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length.
       0.561
Q91_1355
AMP-dependent synthetase and ligase.
  
  
 0.541
Q91_0969
Small subunit of terminal oxygenase component of anthranilate 1,2-dioxygenase.
  
     0.512
cbeB
Benzoate 1,2-dioxygenase small subunit.
 
   
 0.506
Q91_0968
Toluate 1,2-dioxygenase subunit alpha.
  
     0.471
benA
Ring hydroxylating dioxygenase, alpha subunit: Rieske (2Fe-2S) region protein.
 
     0.469
Q91_0444
SEC-C motif domain protein.
       0.428
msrP
Molybdopterin binding Oxidoreductase, transmembrane protein; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, [...]
       0.409
Your Current Organism:
Cycloclasticus sp. P1
NCBI taxonomy Id: 385025
Other names: C. sp. P1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.