STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q91_2018Magnesium chelatase subunit-like ATPase. (504 aa)    
Predicted Functional Partners:
Q91_2103
SMF protein.
 
 0.915
comF
Phosphoribosyltransferase.
 
  
 0.842
Q91_0578
Hypothetical protein; Belongs to the UPF0102 family.
 
  
 0.778
def
Peptide deformylase 1; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
      0.734
Q91_0842
Hydrolase,metallo-beta-lactamase superfamily.
 
  
 0.695
Q91_2017
Hypothetical protein.
       0.695
rep
ATP-dependent DNA helicase Rep; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction.
 
     0.664
Q91_0626
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase.
  
    0.603
Q91_1427
Diguanylate cyclase.
  
    0.603
Q91_2016
Transmembrane protein.
       0.495
Your Current Organism:
Cycloclasticus sp. P1
NCBI taxonomy Id: 385025
Other names: C. sp. P1
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