STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q91_2189Ibuprofen CoA ligase. (524 aa)    
Predicted Functional Partners:
Q91_1355
AMP-dependent synthetase and ligase.
0.994
Q91_2191
Thiolase/acyl transferase.
 
  
 0.840
Q91_2190
Hypothetical protein.
  
    0.776
Q91_2193
Ibuprofen CoA dioxygenase large subunit.
  
    0.775
Q91_2192
Aromatic-ring-hydroxylating dioxygenase beta subunit.
       0.773
Q91_0786
Respiratory-chain NADH dehydrogenase domain 51 kDa subunit.
    
 
 0.757
Q91_1440
Tungsten-containing formate dehydrogenase beta subunit.
    
 
 0.757
Q91_0696
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.742
aroA
3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
 
      0.724
rplF
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.717
Your Current Organism:
Cycloclasticus sp. P1
NCBI taxonomy Id: 385025
Other names: C. sp. P1
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.