Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
lwe0143 | lwe0144 | lwe0143 | lwe0144 | DNA polymerase III delta subunit domain protein. | Conserved hypothetical protein. | 0.857 |
lwe0143 | lwe0145 | lwe0143 | lwe0145 | DNA polymerase III delta subunit domain protein. | Conserved hypothetical protein; Involved in initiation control of chromosome replication. Belongs to the YabA family. | 0.894 |
lwe0143 | lwe0146 | lwe0143 | lwe0146 | DNA polymerase III delta subunit domain protein. | Methyltransferase small domain protein. | 0.766 |
lwe0143 | lwe0147 | lwe0143 | lwe0147 | DNA polymerase III delta subunit domain protein. | GIY-YIG domain protein; Belongs to the UPF0213 family. | 0.681 |
lwe0143 | rsmI | lwe0143 | lwe0148 | DNA polymerase III delta subunit domain protein. | Tetrapyrrole methylase family protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.724 |
lwe0144 | lwe0143 | lwe0144 | lwe0143 | Conserved hypothetical protein. | DNA polymerase III delta subunit domain protein. | 0.857 |
lwe0144 | lwe0145 | lwe0144 | lwe0145 | Conserved hypothetical protein. | Conserved hypothetical protein; Involved in initiation control of chromosome replication. Belongs to the YabA family. | 0.836 |
lwe0144 | lwe0146 | lwe0144 | lwe0146 | Conserved hypothetical protein. | Methyltransferase small domain protein. | 0.736 |
lwe0144 | lwe0147 | lwe0144 | lwe0147 | Conserved hypothetical protein. | GIY-YIG domain protein; Belongs to the UPF0213 family. | 0.684 |
lwe0144 | rsmI | lwe0144 | lwe0148 | Conserved hypothetical protein. | Tetrapyrrole methylase family protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.700 |
lwe0145 | lwe0143 | lwe0145 | lwe0143 | Conserved hypothetical protein; Involved in initiation control of chromosome replication. Belongs to the YabA family. | DNA polymerase III delta subunit domain protein. | 0.894 |
lwe0145 | lwe0144 | lwe0145 | lwe0144 | Conserved hypothetical protein; Involved in initiation control of chromosome replication. Belongs to the YabA family. | Conserved hypothetical protein. | 0.836 |
lwe0145 | lwe0146 | lwe0145 | lwe0146 | Conserved hypothetical protein; Involved in initiation control of chromosome replication. Belongs to the YabA family. | Methyltransferase small domain protein. | 0.715 |
lwe0145 | lwe0147 | lwe0145 | lwe0147 | Conserved hypothetical protein; Involved in initiation control of chromosome replication. Belongs to the YabA family. | GIY-YIG domain protein; Belongs to the UPF0213 family. | 0.703 |
lwe0145 | rsmI | lwe0145 | lwe0148 | Conserved hypothetical protein; Involved in initiation control of chromosome replication. Belongs to the YabA family. | Tetrapyrrole methylase family protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.704 |
lwe0146 | lwe0143 | lwe0146 | lwe0143 | Methyltransferase small domain protein. | DNA polymerase III delta subunit domain protein. | 0.766 |
lwe0146 | lwe0144 | lwe0146 | lwe0144 | Methyltransferase small domain protein. | Conserved hypothetical protein. | 0.736 |
lwe0146 | lwe0145 | lwe0146 | lwe0145 | Methyltransferase small domain protein. | Conserved hypothetical protein; Involved in initiation control of chromosome replication. Belongs to the YabA family. | 0.715 |
lwe0146 | lwe0147 | lwe0146 | lwe0147 | Methyltransferase small domain protein. | GIY-YIG domain protein; Belongs to the UPF0213 family. | 0.907 |
lwe0146 | rsmI | lwe0146 | lwe0148 | Methyltransferase small domain protein. | Tetrapyrrole methylase family protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.917 |
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