Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
lwe0484 | lwe0552 | Putative membrane protein. | Putative secreted protein. | 0.666 |
lwe0484 | lwe0553 | Putative membrane protein. | Putative secreted protein. | 0.624 |
lwe0484 | lwe0790 | Putative membrane protein. | Conserved hypothetical protein. | 0.402 |
lwe0484 | lwe1043 | Putative membrane protein. | Conserved hypothetical protein; Belongs to the UPF0637 family. | 0.436 |
lwe0552 | lwe0484 | Putative secreted protein. | Putative membrane protein. | 0.666 |
lwe0552 | lwe0553 | Putative secreted protein. | Putative secreted protein. | 0.903 |
lwe0552 | lwe0790 | Putative secreted protein. | Conserved hypothetical protein. | 0.816 |
lwe0552 | lwe1043 | Putative secreted protein. | Conserved hypothetical protein; Belongs to the UPF0637 family. | 0.489 |
lwe0553 | lwe0484 | Putative secreted protein. | Putative membrane protein. | 0.624 |
lwe0553 | lwe0552 | Putative secreted protein. | Putative secreted protein. | 0.903 |
lwe0553 | lwe1043 | Putative secreted protein. | Conserved hypothetical protein; Belongs to the UPF0637 family. | 0.621 |
lwe0790 | lwe0484 | Conserved hypothetical protein. | Putative membrane protein. | 0.402 |
lwe0790 | lwe0552 | Conserved hypothetical protein. | Putative secreted protein. | 0.816 |
lwe0790 | lwe1043 | Conserved hypothetical protein. | Conserved hypothetical protein; Belongs to the UPF0637 family. | 0.587 |
lwe0922 | lwe1043 | Conserved hypothetical protein. | Conserved hypothetical protein; Belongs to the UPF0637 family. | 0.497 |
lwe1042 | lwe1043 | Magnesium transporter, CorA family. | Conserved hypothetical protein; Belongs to the UPF0637 family. | 0.448 |
lwe1043 | lwe0484 | Conserved hypothetical protein; Belongs to the UPF0637 family. | Putative membrane protein. | 0.436 |
lwe1043 | lwe0552 | Conserved hypothetical protein; Belongs to the UPF0637 family. | Putative secreted protein. | 0.489 |
lwe1043 | lwe0553 | Conserved hypothetical protein; Belongs to the UPF0637 family. | Putative secreted protein. | 0.621 |
lwe1043 | lwe0790 | Conserved hypothetical protein; Belongs to the UPF0637 family. | Conserved hypothetical protein. | 0.587 |
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