Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but resolution at 400 dpi
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as simple tabular text output:
TSV: tab separated values - can be opened in Excel
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and annotated functions of the network proteins
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
dgt | dnaE | lwe2606 | lwe1587 | annotation not available | annotation not available | 0.900 |
dgt | dnaN | lwe2606 | lwe0002 | annotation not available | Beta sliding clamp; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3’-5’ exonuclease proofreading activity. The beta chain is required for initiation of replication as [...] | 0.902 |
dgt | dnaX | lwe2606 | lwe2655 | annotation not available | DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity | 0.902 |
dgt | lwe0143 | lwe2606 | lwe0143 | annotation not available | annotation not available | 0.900 |
dgt | lwe1494 | lwe2606 | lwe1494 | annotation not available | annotation not available | 0.902 |
dgt | ndk | lwe2606 | lwe1955 | annotation not available | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate | 0.902 |
dgt | nrdD | lwe2606 | lwe0253 | annotation not available | annotation not available | 0.900 |
dgt | polA | lwe2606 | lwe1578 | annotation not available | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity | 0.904 |
dgt | polC | lwe2606 | lwe1335 | annotation not available | DNA polymerase III PolC-type; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity | 0.900 |
dgt | pykA | lwe2606 | lwe1583 | annotation not available | annotation not available | 0.902 |
dnaE | dgt | lwe1587 | lwe2606 | annotation not available | annotation not available | 0.900 |
dnaE | dnaN | lwe1587 | lwe0002 | annotation not available | Beta sliding clamp; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3’-5’ exonuclease proofreading activity. The beta chain is required for initiation of replication as [...] | 0.977 |
dnaE | dnaX | lwe1587 | lwe2655 | annotation not available | DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity | 0.981 |
dnaE | lwe0143 | lwe1587 | lwe0143 | annotation not available | annotation not available | 0.957 |
dnaE | lwe1494 | lwe1587 | lwe1494 | annotation not available | annotation not available | 0.945 |
dnaE | ndk | lwe1587 | lwe1955 | annotation not available | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate | 0.906 |
dnaE | nrdD | lwe1587 | lwe0253 | annotation not available | annotation not available | 0.900 |
dnaE | polA | lwe1587 | lwe1578 | annotation not available | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity | 0.982 |
dnaE | polC | lwe1587 | lwe1335 | annotation not available | DNA polymerase III PolC-type; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity | 0.865 |
dnaE | pykA | lwe1587 | lwe1583 | annotation not available | annotation not available | 0.969 |
page 1 of 6