STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lwe1876Conserved hypothetical protein; Belongs to the UPF0346 family. (77 aa)    
Predicted Functional Partners:
lwe1881
Lipase/acylhydrolase, putative.
 
  
 0.818
deoD
Purine nucleoside phosphorylase.
       0.805
lwe1880
Conserved hypothetical protein.
 
   
 0.778
lwe0905
Conserved membrane protein; Belongs to the LTA synthase family.
  
     0.730
lwe1948
Conserved hypothetical protein.
 
     0.720
lwe0716
Secreted lipase/acylhydrolase, putative.
 
  
 0.670
lwe1353
Conserved hypothetical protein.
  
   
 0.653
lwe2230
Hypothetical protein.
  
     0.652
lwe1874
D-alanyl-D-alanine carboxypeptidase family protein.
  
    0.629
lwe1877
Oxidoreductase, Gfo/Idh/MocA family.
  
    0.627
Your Current Organism:
Listeria welshimeri
NCBI taxonomy Id: 386043
Other names: L. welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b strain SLCC5334
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.