Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ansA | ansB | lwe1966 | lwe1682 | L-asparaginase. | Asparagine synthetase. | 0.915 |
ansA | argG | lwe1966 | lwe2111 | L-asparaginase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.912 |
ansA | aspB | lwe1966 | lwe1916 | L-asparaginase. | Aspartate aminotransferase. | 0.910 |
ansA | gadB | lwe1966 | lwe2381 | L-asparaginase. | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | 0.831 |
ansA | panD | lwe1966 | lwe1919 | L-asparaginase. | Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.862 |
ansA | purA | lwe1966 | lwe0046 | L-asparaginase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.913 |
ansA | pyrB | lwe1966 | lwe1857 | L-asparaginase. | Aspartate transcarbamoylase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.900 |
ansB | ansA | lwe1682 | lwe1966 | Asparagine synthetase. | L-asparaginase. | 0.915 |
ansB | argG | lwe1682 | lwe2111 | Asparagine synthetase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.922 |
ansB | aspB | lwe1682 | lwe1916 | Asparagine synthetase. | Aspartate aminotransferase. | 0.910 |
ansB | gadB | lwe1682 | lwe2381 | Asparagine synthetase. | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | 0.835 |
ansB | panD | lwe1682 | lwe1919 | Asparagine synthetase. | Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.800 |
ansB | purA | lwe1682 | lwe0046 | Asparagine synthetase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.936 |
ansB | pyrB | lwe1682 | lwe1857 | Asparagine synthetase. | Aspartate transcarbamoylase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.933 |
argG | ansA | lwe2111 | lwe1966 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | L-asparaginase. | 0.912 |
argG | ansB | lwe2111 | lwe1682 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Asparagine synthetase. | 0.922 |
argG | aspB | lwe2111 | lwe1916 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Aspartate aminotransferase. | 0.922 |
argG | gadB | lwe2111 | lwe2381 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | 0.815 |
argG | panD | lwe2111 | lwe1919 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.800 |
argG | purA | lwe2111 | lwe0046 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.936 |
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