STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lwe2524Alcohol dehydrogenase, zinc-dependent; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily. (332 aa)    
Predicted Functional Partners:
lwe2523
Reductase family protein.
 
  
 0.936
lwe2522
Amidase, putative.
  
    0.925
lwe2521
Putative membrane protein.
  
  
 0.837
lwe0752
NADH-flavin reductase, putative.
  
  
 0.723
nagB
Glucosamine-6-phosphate isomerase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
  
    0.715
lwe0639
Oxidoreductase, short-chain dehydrogenase/reductase family.
  
 
 0.706
gabD
Succinate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.706
lwe2339
Hypothetical protein.
  
 
 0.700
lwe0519
Alcohol dehydrogenase, iron-dependent.
  
  
 0.689
lacD
Tagatose 1,6-diphosphate aldolase; Belongs to the aldolase LacD family.
  
    0.674
Your Current Organism:
Listeria welshimeri
NCBI taxonomy Id: 386043
Other names: L. welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b strain SLCC5334
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.