STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lwe2639N-acetylmuramoyl-L-alanine amidase, family 4. (587 aa)    
Predicted Functional Partners:
lwe0651
Flagellar basal-body rod protein, putative; Belongs to the flagella basal body rod proteins family.
  
 
 0.686
lwe2638
Transcriptional regulator, TetR family.
 
   
 0.661
flgK
Flagellar hook-associated protein 1-related protein.
 
  
 0.637
lwe1240
Phage lysin, putative.
 
  
 0.623
flgD
Flagellar hook assembly protein FlgD.
 
  
 0.619
fliF
Flagellar M-ring protein FliF.
 
  
 0.615
lwe1534
N-acetylmuramoyl-L-alanine amidase.
 
  
 0.614
lwe2452
Peptidase, M48 family.
 
  
 0.611
flgC
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
  
  
 0.598
flgB
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
  
  
 0.594
Your Current Organism:
Listeria welshimeri
NCBI taxonomy Id: 386043
Other names: L. welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b strain SLCC5334
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.