Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK60571.1 | rbsD | NT01CX_1478 | NT01CX_0165 | 2-dehydro-3-deoxygluconokinase; Identified by match to protein family HMM PF00294. | Ribose ABC transporter protein RbsD; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. | 0.683 |
| ABK60803.1 | ABK61014.1 | NT01CX_0163 | NT01CX_0162 | Ribose ABC transporter, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | Ribose ABC transporter, periplasmic D-ribose-binding protein; Identified by match to protein family HMM PF00532. | 0.999 |
| ABK60803.1 | ABK62314.1 | NT01CX_0163 | NT01CX_0161 | Ribose ABC transporter, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | Identified by match to protein family HMM PF00356; match to protein family HMM PF00532. | 0.790 |
| ABK60803.1 | ABK62317.1 | NT01CX_0163 | NT01CX_0167 | Ribose ABC transporter, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | Conserved hypothetical protein. | 0.454 |
| ABK60803.1 | rbsA-2 | NT01CX_0163 | NT01CX_0164 | Ribose ABC transporter, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | Ribose transport ATP-binding protein rbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. | 0.999 |
| ABK60803.1 | rbsD | NT01CX_0163 | NT01CX_0165 | Ribose ABC transporter, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | Ribose ABC transporter protein RbsD; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. | 0.988 |
| ABK60803.1 | rbsK | NT01CX_0163 | NT01CX_0166 | Ribose ABC transporter, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.972 |
| ABK61014.1 | ABK60803.1 | NT01CX_0162 | NT01CX_0163 | Ribose ABC transporter, periplasmic D-ribose-binding protein; Identified by match to protein family HMM PF00532. | Ribose ABC transporter, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | 0.999 |
| ABK61014.1 | ABK62314.1 | NT01CX_0162 | NT01CX_0161 | Ribose ABC transporter, periplasmic D-ribose-binding protein; Identified by match to protein family HMM PF00532. | Identified by match to protein family HMM PF00356; match to protein family HMM PF00532. | 0.779 |
| ABK61014.1 | ABK62317.1 | NT01CX_0162 | NT01CX_0167 | Ribose ABC transporter, periplasmic D-ribose-binding protein; Identified by match to protein family HMM PF00532. | Conserved hypothetical protein. | 0.424 |
| ABK61014.1 | rbsA-2 | NT01CX_0162 | NT01CX_0164 | Ribose ABC transporter, periplasmic D-ribose-binding protein; Identified by match to protein family HMM PF00532. | Ribose transport ATP-binding protein rbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. | 0.998 |
| ABK61014.1 | rbsD | NT01CX_0162 | NT01CX_0165 | Ribose ABC transporter, periplasmic D-ribose-binding protein; Identified by match to protein family HMM PF00532. | Ribose ABC transporter protein RbsD; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. | 0.994 |
| ABK61014.1 | rbsK | NT01CX_0162 | NT01CX_0166 | Ribose ABC transporter, periplasmic D-ribose-binding protein; Identified by match to protein family HMM PF00532. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.977 |
| ABK62314.1 | ABK60803.1 | NT01CX_0161 | NT01CX_0163 | Identified by match to protein family HMM PF00356; match to protein family HMM PF00532. | Ribose ABC transporter, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | 0.790 |
| ABK62314.1 | ABK61014.1 | NT01CX_0161 | NT01CX_0162 | Identified by match to protein family HMM PF00356; match to protein family HMM PF00532. | Ribose ABC transporter, periplasmic D-ribose-binding protein; Identified by match to protein family HMM PF00532. | 0.779 |
| ABK62314.1 | rbsA-2 | NT01CX_0161 | NT01CX_0164 | Identified by match to protein family HMM PF00356; match to protein family HMM PF00532. | Ribose transport ATP-binding protein rbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. | 0.737 |
| ABK62314.1 | rbsD | NT01CX_0161 | NT01CX_0165 | Identified by match to protein family HMM PF00356; match to protein family HMM PF00532. | Ribose ABC transporter protein RbsD; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. | 0.696 |
| ABK62314.1 | rbsK | NT01CX_0161 | NT01CX_0166 | Identified by match to protein family HMM PF00356; match to protein family HMM PF00532. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.829 |
| ABK62317.1 | ABK60803.1 | NT01CX_0167 | NT01CX_0163 | Conserved hypothetical protein. | Ribose ABC transporter, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | 0.454 |
| ABK62317.1 | ABK61014.1 | NT01CX_0167 | NT01CX_0162 | Conserved hypothetical protein. | Ribose ABC transporter, periplasmic D-ribose-binding protein; Identified by match to protein family HMM PF00532. | 0.424 |
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