STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK62113.1Glycerol-3-phosphate dehydrogenase; Identified by match to protein family HMM PF01266; match to protein family HMM PF04324. (477 aa)    
Predicted Functional Partners:
ABK61584.1
Sarcosine oxidase alpha subunit; Identified by match to protein family HMM PF00070.
  
 0.975
ABK62553.1
Conserved protein.
 
    0.960
ABK62477.1
Sarcosine oxidase alpha subunit; Identified by match to protein family HMM PF00070.
  
 0.954
ABK62554.1
Glycerol uptake operon antiterminator regulatory protein; Identified by match to protein family HMM PF04309.
 
     0.862
ABK62596.1
Dihydroxyacetone kinase, phosphotransfer subunit; Identified by match to protein family HMM PF03610; match to protein family HMM TIGR02364.
    
  0.808
ABK60518.1
Dihydroxyacetone kinase, L subunit; Identified by match to protein family HMM PF02734; match to protein family HMM TIGR02365.
    
  0.806
dhaK
Dihydroxyacetone kinase, DhaK subunit; Identified by match to protein family HMM PF02733; match to protein family HMM TIGR02363.
    
  0.806
dgkA
Diacylglycerol kinase; Identified by match to protein family HMM PF01219; match to protein family HMM PF01569.
     
  0.800
ABK62305.1
1-acyl-sn-glycerol-3-phosphate acyltransferase, putative; Identified by match to protein family HMM PF01553; match to protein family HMM TIGR00530; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
  0.800
ABK60440.1
1-acyl-sn-glycerol-3-phosphate acyltransferase, putative; Identified by match to protein family HMM PF01553.
    
  0.800
Your Current Organism:
Clostridium novyi
NCBI taxonomy Id: 386415
Other names: C. novyi NT, Clostridium novyi NT, Clostridium novyi str. NT, Clostridium novyi strain NT, Clostridium novyi-NT
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.