Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK61670.1 | ABK62048.1 | NT01CX_2083 | NT01CX_0308 | L-threonine-O-3-phosphate decarboxylase, putative; Identified by match to protein family HMM PF00155; match to protein family HMM TIGR01140. | Pyridine nucleotide-disulphide oxidoreductase family protein; Identified by match to protein family HMM PF00070; match to protein family HMM PF00581; match to protein family HMM PF02852. | 0.525 |
| ABK61670.1 | hisA | NT01CX_2083 | NT01CX_1065 | L-threonine-O-3-phosphate decarboxylase, putative; Identified by match to protein family HMM PF00155; match to protein family HMM TIGR01140. | Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; Identified by match to protein family HMM PF00977; match to protein family HMM TIGR00007. | 0.786 |
| ABK61670.1 | hisB | NT01CX_2083 | NT01CX_1064 | L-threonine-O-3-phosphate decarboxylase, putative; Identified by match to protein family HMM PF00155; match to protein family HMM TIGR01140. | Imidazoleglycerol-phosphate dehydratase (IGPD); Identified by match to protein family HMM PF00475. | 0.880 |
| ABK61670.1 | hisD | NT01CX_2083 | NT01CX_1062 | L-threonine-O-3-phosphate decarboxylase, putative; Identified by match to protein family HMM PF00155; match to protein family HMM TIGR01140. | Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | 0.928 |
| ABK61670.1 | hisE | NT01CX_2083 | NT01CX_1067 | L-threonine-O-3-phosphate decarboxylase, putative; Identified by match to protein family HMM PF00155; match to protein family HMM TIGR01140. | phosphoribosyl-ATP pyrophosphohydrolase; Identified by match to protein family HMM PF01503. | 0.644 |
| ABK61670.1 | hisF | NT01CX_2083 | NT01CX_1066 | L-threonine-O-3-phosphate decarboxylase, putative; Identified by match to protein family HMM PF00155; match to protein family HMM TIGR01140. | Imidazole glycerol phosphate synthase subunit HisF; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP; Belongs to the PRA-CH family. | 0.999 |
| ABK61670.1 | hisG | NT01CX_2083 | NT01CX_1061 | L-threonine-O-3-phosphate decarboxylase, putative; Identified by match to protein family HMM PF00155; match to protein family HMM TIGR01140. | ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily. | 0.777 |
| ABK61670.1 | hisS | NT01CX_2083 | NT01CX_1060 | L-threonine-O-3-phosphate decarboxylase, putative; Identified by match to protein family HMM PF00155; match to protein family HMM TIGR01140. | histidyl-tRNA synthetase; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine. | 0.680 |
| ABK62048.1 | ABK61670.1 | NT01CX_0308 | NT01CX_2083 | Pyridine nucleotide-disulphide oxidoreductase family protein; Identified by match to protein family HMM PF00070; match to protein family HMM PF00581; match to protein family HMM PF02852. | L-threonine-O-3-phosphate decarboxylase, putative; Identified by match to protein family HMM PF00155; match to protein family HMM TIGR01140. | 0.525 |
| ABK62048.1 | hisA | NT01CX_0308 | NT01CX_1065 | Pyridine nucleotide-disulphide oxidoreductase family protein; Identified by match to protein family HMM PF00070; match to protein family HMM PF00581; match to protein family HMM PF02852. | Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; Identified by match to protein family HMM PF00977; match to protein family HMM TIGR00007. | 0.522 |
| ABK62048.1 | hisC | NT01CX_0308 | NT01CX_1063 | Pyridine nucleotide-disulphide oxidoreductase family protein; Identified by match to protein family HMM PF00070; match to protein family HMM PF00581; match to protein family HMM PF02852. | Histidinol-phosphate aminotransferase; Identified by match to protein family HMM PF00155; match to protein family HMM TIGR01141; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.525 |
| ABK62048.1 | hisE | NT01CX_0308 | NT01CX_1067 | Pyridine nucleotide-disulphide oxidoreductase family protein; Identified by match to protein family HMM PF00070; match to protein family HMM PF00581; match to protein family HMM PF02852. | phosphoribosyl-ATP pyrophosphohydrolase; Identified by match to protein family HMM PF01503. | 0.593 |
| ABK62048.1 | hisF | NT01CX_0308 | NT01CX_1066 | Pyridine nucleotide-disulphide oxidoreductase family protein; Identified by match to protein family HMM PF00070; match to protein family HMM PF00581; match to protein family HMM PF02852. | Imidazole glycerol phosphate synthase subunit HisF; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP; Belongs to the PRA-CH family. | 0.999 |
| ABK62048.1 | hisG | NT01CX_0308 | NT01CX_1061 | Pyridine nucleotide-disulphide oxidoreductase family protein; Identified by match to protein family HMM PF00070; match to protein family HMM PF00581; match to protein family HMM PF02852. | ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily. | 0.619 |
| ABK62048.1 | tadA | NT01CX_0308 | NT01CX_0828 | Pyridine nucleotide-disulphide oxidoreductase family protein; Identified by match to protein family HMM PF00070; match to protein family HMM PF00581; match to protein family HMM PF02852. | Cytidine/deoxycytidylate deaminase family protein, pytative; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.426 |
| hisA | ABK61670.1 | NT01CX_1065 | NT01CX_2083 | Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; Identified by match to protein family HMM PF00977; match to protein family HMM TIGR00007. | L-threonine-O-3-phosphate decarboxylase, putative; Identified by match to protein family HMM PF00155; match to protein family HMM TIGR01140. | 0.786 |
| hisA | ABK62048.1 | NT01CX_1065 | NT01CX_0308 | Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; Identified by match to protein family HMM PF00977; match to protein family HMM TIGR00007. | Pyridine nucleotide-disulphide oxidoreductase family protein; Identified by match to protein family HMM PF00070; match to protein family HMM PF00581; match to protein family HMM PF02852. | 0.522 |
| hisA | hisB | NT01CX_1065 | NT01CX_1064 | Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; Identified by match to protein family HMM PF00977; match to protein family HMM TIGR00007. | Imidazoleglycerol-phosphate dehydratase (IGPD); Identified by match to protein family HMM PF00475. | 0.997 |
| hisA | hisC | NT01CX_1065 | NT01CX_1063 | Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; Identified by match to protein family HMM PF00977; match to protein family HMM TIGR00007. | Histidinol-phosphate aminotransferase; Identified by match to protein family HMM PF00155; match to protein family HMM TIGR01141; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.988 |
| hisA | hisD | NT01CX_1065 | NT01CX_1062 | Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; Identified by match to protein family HMM PF00977; match to protein family HMM TIGR00007. | Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | 0.998 |
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