Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK60757.1 | ABK61166.1 | NT01CX_1280 | NT01CX_1277 | Putative membrane-bound metal-dependent hydrolase; Identified by match to protein family HMM PF04307. | Cell cycle protein, FtsW/RodA/SpoVE family; Identified by match to protein family HMM PF01098; Belongs to the SEDS family. | 0.556 |
| ABK60757.1 | ABK61350.1 | NT01CX_1280 | NT01CX_1282 | Putative membrane-bound metal-dependent hydrolase; Identified by match to protein family HMM PF04307. | PHP family protein; Identified by match to protein family HMM PF02231; match to protein family HMM PF02811. | 0.732 |
| ABK60757.1 | ABK61581.1 | NT01CX_1280 | NT01CX_1278 | Putative membrane-bound metal-dependent hydrolase; Identified by match to protein family HMM PF04307. | Penicillin-binding protein, putative; Identified by match to protein family HMM PF00905. | 0.574 |
| ABK60757.1 | murB | NT01CX_1280 | NT01CX_1283 | Putative membrane-bound metal-dependent hydrolase; Identified by match to protein family HMM PF04307. | UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. | 0.553 |
| ABK60757.1 | uvrA | NT01CX_1280 | NT01CX_1275 | Putative membrane-bound metal-dependent hydrolase; Identified by match to protein family HMM PF04307. | Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.413 |
| ABK60757.1 | uvrC | NT01CX_1280 | NT01CX_1281 | Putative membrane-bound metal-dependent hydrolase; Identified by match to protein family HMM PF04307. | Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.739 |
| ABK61166.1 | ABK60757.1 | NT01CX_1277 | NT01CX_1280 | Cell cycle protein, FtsW/RodA/SpoVE family; Identified by match to protein family HMM PF01098; Belongs to the SEDS family. | Putative membrane-bound metal-dependent hydrolase; Identified by match to protein family HMM PF04307. | 0.556 |
| ABK61166.1 | ABK61350.1 | NT01CX_1277 | NT01CX_1282 | Cell cycle protein, FtsW/RodA/SpoVE family; Identified by match to protein family HMM PF01098; Belongs to the SEDS family. | PHP family protein; Identified by match to protein family HMM PF02231; match to protein family HMM PF02811. | 0.689 |
| ABK61166.1 | ABK61581.1 | NT01CX_1277 | NT01CX_1278 | Cell cycle protein, FtsW/RodA/SpoVE family; Identified by match to protein family HMM PF01098; Belongs to the SEDS family. | Penicillin-binding protein, putative; Identified by match to protein family HMM PF00905. | 0.995 |
| ABK61166.1 | murB | NT01CX_1277 | NT01CX_1283 | Cell cycle protein, FtsW/RodA/SpoVE family; Identified by match to protein family HMM PF01098; Belongs to the SEDS family. | UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. | 0.714 |
| ABK61166.1 | polA | NT01CX_1277 | NT01CX_1677 | Cell cycle protein, FtsW/RodA/SpoVE family; Identified by match to protein family HMM PF01098; Belongs to the SEDS family. | DNA polymerase I, polA; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.436 |
| ABK61166.1 | uvrA | NT01CX_1277 | NT01CX_1275 | Cell cycle protein, FtsW/RodA/SpoVE family; Identified by match to protein family HMM PF01098; Belongs to the SEDS family. | Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.683 |
| ABK61166.1 | uvrB | NT01CX_1277 | NT01CX_1274 | Cell cycle protein, FtsW/RodA/SpoVE family; Identified by match to protein family HMM PF01098; Belongs to the SEDS family. | Excinuclease ABC, B subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | 0.617 |
| ABK61166.1 | uvrC | NT01CX_1277 | NT01CX_1281 | Cell cycle protein, FtsW/RodA/SpoVE family; Identified by match to protein family HMM PF01098; Belongs to the SEDS family. | Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.692 |
| ABK61350.1 | ABK60757.1 | NT01CX_1282 | NT01CX_1280 | PHP family protein; Identified by match to protein family HMM PF02231; match to protein family HMM PF02811. | Putative membrane-bound metal-dependent hydrolase; Identified by match to protein family HMM PF04307. | 0.732 |
| ABK61350.1 | ABK61166.1 | NT01CX_1282 | NT01CX_1277 | PHP family protein; Identified by match to protein family HMM PF02231; match to protein family HMM PF02811. | Cell cycle protein, FtsW/RodA/SpoVE family; Identified by match to protein family HMM PF01098; Belongs to the SEDS family. | 0.689 |
| ABK61350.1 | ABK61581.1 | NT01CX_1282 | NT01CX_1278 | PHP family protein; Identified by match to protein family HMM PF02231; match to protein family HMM PF02811. | Penicillin-binding protein, putative; Identified by match to protein family HMM PF00905. | 0.689 |
| ABK61350.1 | murB | NT01CX_1282 | NT01CX_1283 | PHP family protein; Identified by match to protein family HMM PF02231; match to protein family HMM PF02811. | UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. | 0.740 |
| ABK61350.1 | uvrA | NT01CX_1282 | NT01CX_1275 | PHP family protein; Identified by match to protein family HMM PF02231; match to protein family HMM PF02811. | Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.548 |
| ABK61350.1 | uvrB | NT01CX_1282 | NT01CX_1274 | PHP family protein; Identified by match to protein family HMM PF02231; match to protein family HMM PF02811. | Excinuclease ABC, B subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | 0.448 |
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