Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK60444.1 | ABK60654.1 | NT01CX_1562 | NT01CX_1561 | Ferric uptake regulation protein; Identified by match to protein family HMM PF01475; Belongs to the Fur family. | Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621. | 0.501 |
ABK60444.1 | ABK62191.1 | NT01CX_1562 | NT01CX_1563 | Ferric uptake regulation protein; Identified by match to protein family HMM PF01475; Belongs to the Fur family. | Conserved protein. | 0.886 |
ABK60444.1 | mntP | NT01CX_1562 | NT01CX_1560 | Ferric uptake regulation protein; Identified by match to protein family HMM PF01475; Belongs to the Fur family. | Integral membrane protein; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family. | 0.682 |
ABK60654.1 | ABK60444.1 | NT01CX_1561 | NT01CX_1562 | Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621. | Ferric uptake regulation protein; Identified by match to protein family HMM PF01475; Belongs to the Fur family. | 0.501 |
ABK60654.1 | ABK62191.1 | NT01CX_1561 | NT01CX_1563 | Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621. | Conserved protein. | 0.418 |
ABK60654.1 | mntP | NT01CX_1561 | NT01CX_1560 | Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621. | Integral membrane protein; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family. | 0.619 |
ABK60835.1 | ABK61754.1 | NT01CX_1557 | NT01CX_1558 | Conserved protein, putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.753 |
ABK60835.1 | ABK62142.1 | NT01CX_1557 | NT01CX_1559 | Conserved protein, putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.685 |
ABK60835.1 | mntP | NT01CX_1557 | NT01CX_1560 | Conserved protein, putative. | Integral membrane protein; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family. | 0.498 |
ABK61754.1 | ABK60835.1 | NT01CX_1558 | NT01CX_1557 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved protein, putative. | 0.753 |
ABK61754.1 | ABK62142.1 | NT01CX_1558 | NT01CX_1559 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.707 |
ABK61754.1 | mntP | NT01CX_1558 | NT01CX_1560 | Hypothetical protein; Identified by Glimmer2; putative. | Integral membrane protein; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family. | 0.441 |
ABK62142.1 | ABK60835.1 | NT01CX_1559 | NT01CX_1557 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved protein, putative. | 0.685 |
ABK62142.1 | ABK61754.1 | NT01CX_1559 | NT01CX_1558 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.707 |
ABK62142.1 | mntP | NT01CX_1559 | NT01CX_1560 | Hypothetical protein; Identified by Glimmer2; putative. | Integral membrane protein; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family. | 0.490 |
ABK62191.1 | ABK60444.1 | NT01CX_1563 | NT01CX_1562 | Conserved protein. | Ferric uptake regulation protein; Identified by match to protein family HMM PF01475; Belongs to the Fur family. | 0.886 |
ABK62191.1 | ABK60654.1 | NT01CX_1563 | NT01CX_1561 | Conserved protein. | Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621. | 0.418 |
ABK62191.1 | mntP | NT01CX_1563 | NT01CX_1560 | Conserved protein. | Integral membrane protein; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family. | 0.424 |
mntP | ABK60444.1 | NT01CX_1560 | NT01CX_1562 | Integral membrane protein; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family. | Ferric uptake regulation protein; Identified by match to protein family HMM PF01475; Belongs to the Fur family. | 0.682 |
mntP | ABK60654.1 | NT01CX_1560 | NT01CX_1561 | Integral membrane protein; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family. | Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621. | 0.619 |
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