node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK60428.1 | ABK62154.1 | NT01CX_1109 | NT01CX_2242 | Ribosomal protein L7AE family, putative. | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.738 |
ABK60428.1 | guaA | NT01CX_1109 | NT01CX_0459 | Ribosomal protein L7AE family, putative. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.429 |
ABK60428.1 | infB | NT01CX_1109 | NT01CX_2136 | Ribosomal protein L7AE family, putative. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.908 |
ABK60428.1 | nusA | NT01CX_1109 | NT01CX_2138 | Ribosomal protein L7AE family, putative. | Transcription termination factor NusA; Participates in both transcription termination and antitermination. | 0.860 |
ABK60428.1 | rimP | NT01CX_1109 | NT01CX_2139 | Ribosomal protein L7AE family, putative. | Hypothetical UPF0090 protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.690 |
ABK60428.1 | rpsO | NT01CX_1109 | NT01CX_2131 | Ribosomal protein L7AE family, putative. | Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.996 |
ABK60428.1 | truB | NT01CX_1109 | NT01CX_2133 | Ribosomal protein L7AE family, putative. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.993 |
ABK61231.1 | infB | NT01CX_2134 | NT01CX_2136 | Identified by match to protein family HMM PF01368; match to protein family HMM PF02272. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.884 |
ABK61231.1 | nusA | NT01CX_2134 | NT01CX_2138 | Identified by match to protein family HMM PF01368; match to protein family HMM PF02272. | Transcription termination factor NusA; Participates in both transcription termination and antitermination. | 0.738 |
ABK61231.1 | rbfA | NT01CX_2134 | NT01CX_2135 | Identified by match to protein family HMM PF01368; match to protein family HMM PF02272. | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 0.938 |
ABK61231.1 | ribF | NT01CX_2134 | NT01CX_2132 | Identified by match to protein family HMM PF01368; match to protein family HMM PF02272. | Riboflavin biosynthesis protein RibF; Identified by match to protein family HMM PF01687; match to protein family HMM PF06574; match to protein family HMM TIGR00083; Belongs to the ribF family. | 0.861 |
ABK61231.1 | rimP | NT01CX_2134 | NT01CX_2139 | Identified by match to protein family HMM PF01368; match to protein family HMM PF02272. | Hypothetical UPF0090 protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.731 |
ABK61231.1 | rpsO | NT01CX_2134 | NT01CX_2131 | Identified by match to protein family HMM PF01368; match to protein family HMM PF02272. | Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.658 |
ABK61231.1 | truB | NT01CX_2134 | NT01CX_2133 | Identified by match to protein family HMM PF01368; match to protein family HMM PF02272. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.861 |
ABK62154.1 | ABK60428.1 | NT01CX_2242 | NT01CX_1109 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Ribosomal protein L7AE family, putative. | 0.738 |
ABK62154.1 | guaA | NT01CX_2242 | NT01CX_0459 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.543 |
ABK62154.1 | nusA | NT01CX_2242 | NT01CX_2138 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Transcription termination factor NusA; Participates in both transcription termination and antitermination. | 0.866 |
ABK62154.1 | rbfA | NT01CX_2242 | NT01CX_2135 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 0.562 |
ABK62154.1 | ribF | NT01CX_2242 | NT01CX_2132 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Riboflavin biosynthesis protein RibF; Identified by match to protein family HMM PF01687; match to protein family HMM PF06574; match to protein family HMM TIGR00083; Belongs to the ribF family. | 0.575 |
ABK62154.1 | rimP | NT01CX_2242 | NT01CX_2139 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Hypothetical UPF0090 protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.613 |