Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK60380.1 | rnz | NT01CX_2361 | NT01CX_2360 | Conserved hypothetical protein. | Metallo-beta-lactamase family protein, putative; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. | 0.422 |
| ABK61336.1 | ABK61427.1 | NT01CX_2359 | NT01CX_0224 | Co-chaperone GrpE, putative; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of [...] | Sensory transduction histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF01590; match to protein family HMM PF02518. | 0.408 |
| ABK61336.1 | rnz | NT01CX_2359 | NT01CX_2360 | Co-chaperone GrpE, putative; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of [...] | Metallo-beta-lactamase family protein, putative; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. | 0.570 |
| ABK61427.1 | ABK61336.1 | NT01CX_0224 | NT01CX_2359 | Sensory transduction histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF01590; match to protein family HMM PF02518. | Co-chaperone GrpE, putative; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of [...] | 0.408 |
| ABK61427.1 | rnz | NT01CX_0224 | NT01CX_2360 | Sensory transduction histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF01590; match to protein family HMM PF02518. | Metallo-beta-lactamase family protein, putative; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. | 0.460 |
| ABK61626.1 | nifJ | NT01CX_1382 | NT01CX_1854 | Identified by match to protein family HMM PF00485. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM PF02775; match to protein family HMM TIGR02176. | 0.643 |
| ABK61626.1 | rnz | NT01CX_1382 | NT01CX_2360 | Identified by match to protein family HMM PF00485. | Metallo-beta-lactamase family protein, putative; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. | 0.414 |
| ABK61626.1 | rpsF | NT01CX_1382 | NT01CX_0883 | Identified by match to protein family HMM PF00485. | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.728 |
| nifJ | ABK61626.1 | NT01CX_1854 | NT01CX_1382 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM PF02775; match to protein family HMM TIGR02176. | Identified by match to protein family HMM PF00485. | 0.643 |
| nifJ | rnz | NT01CX_1854 | NT01CX_2360 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM PF02775; match to protein family HMM TIGR02176. | Metallo-beta-lactamase family protein, putative; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. | 0.449 |
| rnz | ABK60380.1 | NT01CX_2360 | NT01CX_2361 | Metallo-beta-lactamase family protein, putative; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. | Conserved hypothetical protein. | 0.422 |
| rnz | ABK61336.1 | NT01CX_2360 | NT01CX_2359 | Metallo-beta-lactamase family protein, putative; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. | Co-chaperone GrpE, putative; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of [...] | 0.570 |
| rnz | ABK61427.1 | NT01CX_2360 | NT01CX_0224 | Metallo-beta-lactamase family protein, putative; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. | Sensory transduction histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF01590; match to protein family HMM PF02518. | 0.460 |
| rnz | ABK61626.1 | NT01CX_2360 | NT01CX_1382 | Metallo-beta-lactamase family protein, putative; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. | Identified by match to protein family HMM PF00485. | 0.414 |
| rnz | nifJ | NT01CX_2360 | NT01CX_1854 | Metallo-beta-lactamase family protein, putative; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM PF02775; match to protein family HMM TIGR02176. | 0.449 |
| rnz | rpsF | NT01CX_2360 | NT01CX_0883 | Metallo-beta-lactamase family protein, putative; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.415 |
| rpsF | ABK61626.1 | NT01CX_0883 | NT01CX_1382 | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | Identified by match to protein family HMM PF00485. | 0.728 |
| rpsF | rnz | NT01CX_0883 | NT01CX_2360 | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | Metallo-beta-lactamase family protein, putative; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. | 0.415 |