STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC22A3LOW QUALITY PROTEIN: solute carrier family 22 member 3. (556 aa)    
Predicted Functional Partners:
PODXL
LOW QUALITY PROTEIN: podocalyxin.
    
 0.705
AZIN1
Antizyme inhibitor 1 isoform X1; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
   
 
 0.697
RHOQ
Rho-related GTP-binding protein RhoQ.
      
 0.696
LOC102381815
Gamma-aminobutyric acid receptor subunit alpha-3-like; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
      
 0.561
HERC3
Probable E3 ubiquitin-protein ligase HERC3 isoform X1.
      
 0.546
INTS9
Integrator complex subunit 9 isoform X1.
    
 0.504
INTS1
Integrator complex subunit 1.
    
 0.497
INTS11
Integrator complex subunit 11 isoform X1.
    
 0.486
INTS4
Integrator complex subunit 4 isoform X1.
    
 0.475
INTS3
Integrator complex subunit 3.
    
 0.467
Your Current Organism:
Alligator sinensis
NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.