STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MEF2CMyocyte-specific enhancer factor 2C isoform X1. (483 aa)    
Predicted Functional Partners:
MAPK14
Mitogen-activated protein kinase.
   
 0.967
MAPK11
Mitogen-activated protein kinase.
   
 0.967
MAPK12
Mitogen-activated protein kinase.
   
 0.962
MAPK13
Mitogen-activated protein kinase.
   
 0.962
MEF2D
Myocyte-specific enhancer factor 2D isoform X1.
   
0.960
MEF2B
Myocyte-specific enhancer factor 2B isoform X1.
    
0.959
NKX2-5
Homeobox protein Nkx-2.5.
    
 
 0.750
MYOG
Myogenin.
    
 0.639
EP300
Histone acetyltransferase p300 isoform X1.
    
 
 0.634
MYOD1
Myogenic factor.
    
 0.602
Your Current Organism:
Alligator sinensis
NCBI taxonomy Id: 38654
Other names: A. sinensis, Chinese alligator, MNHN 6494
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.