STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs3039Putative oxidoreductase; Similar to YEIA_ECOLI gi|1788469 percent identity 99 in 413 aa (Conserved in E.coli K-12). (413 aa)    
Predicted Functional Partners:
ECs3038
Putative oxidoreductase; Similar to B2146_ECOLI gi|1788468 percent identity 98 in 412 aa (Conserved in E.coli K-12).
 0.999
ECs2000
Putative oxidoreductase; Similar to YDBK_ECOLI gi|1787642 percent identity 99 in 1174 aa (Conserved in E.coli K-12).
  
 
 0.995
ECs3746
Hypothetical protein; Similar to B2873_ECOLI gi|1789237 percent identity 99 in 465 aa (Conserved in E.coli K-12).
 
 0.986
ECs4092
Glutamate synthase small subunit; Similar to GLTD_ECOLI gi|1789606 percent identity 99 in 472 aa (Conserved in E.coli K-12).
 
 0.977
ECs3759
Putative oxidoreductase, Fe-S subunit; Similar to YGFT_ECOLI gi|1789253 percent identity 99 in 644 aa (Conserved in E.coli K-12).
 
 0.973
ECs3330
Putative oxidoreductase Fe-S subunit; Similar to YFFG_ECOLI gi|1788811 percent identity 99 in 659 aa (Conserved in E.coli K-12).
 
 0.959
ECs5341
Putative thymidine phosphorylase; Similar to part (44-440 in 440 aa) of DEOA_ECOLI gi|1790842 percent identity 99 in 397 aa (Conserved in E.coli K-12).
 
  
 0.926
ECs0390
Cytosine deaminase; Similar to CODA_ECOLI gi|1786531 percent identity 98 in 427 aa (Conserved in E.coli K-12).
  
 
 0.921
ECs3360
Uracil phosphoribosyltransferase; Similar to UPP_ECOLI gi|1788844 percent identity 99 in 217 aa (Conserved in E.coli K-12).
   
 
 0.918
ECs4761
Uridine phosphorylase; Similar to UDP_ECOLI gi|1790265 percent identity 99 in 253 aa (Conserved in E.coli K-12).
    
 0.912
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.