STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs4694Ribokinase; Similar to RBSK_ECOLI gi|1790193 percent identity 100 in 309 aa (Conserved in E.coli K-12). (309 aa)    
Predicted Functional Partners:
ECs4690
Membrane-associated component of D-ribose high-affinity transport system; Identical to part (13-151 in 151 aa) of RBSD_ECOLI gi|1790189 percent identity 100 in 144 aa (Conserved in E.coli K-12).
 
 
 0.981
ECs4695
Regulator for rbs operon; Similar to RBSR_ECOLI gi|1790194 percent identity 99 in 330 aa (Conserved in E.coli K-12).
  
 0.972
ECs3785
Ribosephosphate isomerase; Similar to RPIA_ECOLI gi|1789280 percent identity 100 in 219 aa (Conserved in E.coli K-12).
   
 0.947
ECs1712
Phosphoribosylpyrophosphate synthetase; Similar to PRSA_ECOLI gi|1787458 percent identity 99 in 315 aa (Conserved in E.coli K-12).
   
 0.943
ECs4692
D-ribose high-affinity transport system permease protein; Similar to RBSC_ECOLI gi|1790191 percent identity 100 in 321 aa (Conserved in E.coli K-12).
 
  
 0.936
ECs4693
D-ribose periplasmic binding protein; Similar to RBSB_ECOLI gi|1790192 percent identity 99 in 296 aa (Conserved in E.coli K-12).
 
  
 0.930
ECs3327
Transketolase 2 isozyme; Similar to TKTB_ECOLI gi|1788808 percent identity 99 in 667 aa, similar to TKTA_ECOLI gi|2367177 percent identity 75 in 661 aa (Conserved in E.coli K-12).
   
 0.911
ECs3810
Transketolase 1 isozyme; Similar to TKTA_ECOLI gi|2367177 percent identity 99 in 663 aa, similar to TKTB_ECOLI gi|1788808 percent identity 75 in 661 aa (Conserved in E.coli K-12).
   
 0.911
ECs5340
2-deoxyribose-5-phosphate aldolase; Similar to DEOC_ECOLI gi|1790841 percent identity 99 in 259 aa (Conserved in E.coli K-12).
    
 0.907
ECs0719
Phosphoglucomutase; Similar to PGM_ECOLI gi|1786904 percent identity 99 in 546 aa (Conserved in E.coli K-12).
   
 0.905
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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