STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OFLC_LOCUS7253Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (239 aa)    
Predicted Functional Partners:
OFLC_LOCUS157
Uncharacterized protein.
   
 0.997
OFLC_LOCUS2517
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
   
 0.995
A0A183I065
ANK_REP_REGION domain-containing protein.
   
 0.995
OFLC_LOCUS1853
Uncharacterized protein.
   
 0.993
OFLC_LOCUS5501
Uncharacterized protein.
   
 0.993
A0A183HZ41
Uncharacterized protein; Belongs to the synaptobrevin family.
   
 0.992
OFLC_LOCUS5090
Uncharacterized protein.
    
 0.983
OFLC_LOCUS8562
Uncharacterized protein.
    
 0.983
X798_02378
SNARE domain protein.
    
 0.961
OFLC_LOCUS1401
GRASP55/65 family protein.
   
 0.952
Your Current Organism:
Onchocerca flexuosa
NCBI taxonomy Id: 387005
Other names: O. flexuosa
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