STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIS_0187Hypothetical protein. (756 aa)    
Predicted Functional Partners:
NIS_0195
Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
       0.784
NIS_0186
Hypothetical protein.
       0.774
NIS_0188
Hypothetical protein.
       0.774
NIS_0190
Alginate biosynthesis protein Alg8.
       0.774
NIS_0183
Hypothetical protein.
       0.773
NIS_0184
Hypothetical protein.
       0.773
NIS_0185
Conserved hypothetical protein.
       0.773
NIS_0189
Conserved hypothetical protein.
       0.773
NIS_0191
GDP-mannose 6-dehydrogenase; Alginate biosynthesis protein.
       0.773
NIS_0192
Protein phosphatase.
       0.773
Your Current Organism:
Nitratiruptor sp. SB1552
NCBI taxonomy Id: 387092
Other names: N. sp. SB155-2, Nitratiruptor sp. SB155-2
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