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STRINGSTRING
SUN_0006 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_0006" - Nitrogen fixation protein NifU in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_0006Nitrogen fixation protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (324 aa)    
Predicted Functional Partners:
iscS
annotation not available (400 aa)
 
  0.999
dnaK
Chaperone protein DnaK; Acts as a chaperone (627 aa)
 
 
  0.837
SUN_2354
annotation not available (561 aa)
   
        0.809
SUN_1077
annotation not available (152 aa)
 
 
  0.786
SUN_1875
annotation not available (132 aa)
   
   
  0.717
SUN_0512
annotation not available (383 aa)
   
   
  0.671
sufC
annotation not available (252 aa)
   
   
  0.624
SUN_2465
Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine (292 aa)
   
   
  0.604
thiI
tRNA sulfurtransferase; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS (486 aa)
         
  0.602
ilvD
annotation not available (563 aa)
     
 
  0.595
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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