STRINGSTRING
SUN_0031 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_0031" - Type II secretion system protein E in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_0031Type II secretion system protein E (503 aa)    
Predicted Functional Partners:
SUN_0030
Type II secretion system protein D (678 aa)
 
   
  0.987
SUN_0024
Type II secretion system protein G (147 aa)
 
 
  0.963
SUN_0021
Type II secretion system protein F (404 aa)
 
   
  0.957
SUN_1671
General secretory pathway protein F (417 aa)
 
   
  0.927
SUN_0029
Hypothetical protein (280 aa)
 
   
  0.922
SUN_1839
Type 4 prepilin peptidase (246 aa)
 
 
  0.921
SUN_1675
General secretory pathway protein D (536 aa)
 
   
  0.874
SUN_0028
Hypothetical protein (171 aa)
              0.862
SUN_0026
Hypothetical protein (310 aa)
              0.861
SUN_0032
Hypothetical protein (213 aa)
              0.861
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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