STRINGSTRING
SUN_0103 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_0103" - Oligosaccharide transferase in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_0103Oligosaccharide transferase (706 aa)    
Predicted Functional Partners:
SUN_0104
Undecaprenyl-phosphate galactose phosphotransferase (199 aa)
         
  0.915
SUN_0102
Glycosyl transferase family protein (330 aa)
   
 
  0.901
SUN_0106
Sugar epimerase/dehydratase (593 aa)
         
  0.895
SUN_0105
Aminotransferase (366 aa)
   
   
  0.875
secY
Preprotein translocase subunit Y; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently (420 aa)
     
 
  0.818
SUN_1912
Hypothetical protein (217 aa)
   
          0.778
SUN_0457
Hypothetical protein (181 aa)
   
          0.776
SUN_2250
Hypothetical protein (161 aa)
   
          0.771
SUN_0608
Hypothetical protein (159 aa)
   
          0.751
SUN_2200
Hypothetical protein (79 aa)
   
          0.748
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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