STRINGSTRING
SUN_0107 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_0107" - DNA uptake protein in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_0107DNA uptake protein (111 aa)    
Predicted Functional Partners:
SUN_0103
Oligosaccharide transferase (706 aa)
 
          0.730
SUN_0106
Sugar epimerase/dehydratase (593 aa)
   
        0.712
SUN_0104
Undecaprenyl-phosphate galactose phosphotransferase (199 aa)
         
  0.706
SUN_0105
Aminotransferase (366 aa)
              0.693
SUN_0102
Glycosyl transferase family protein (330 aa)
              0.692
gltX1
glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction- glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) (462 aa)
              0.621
ilvC
Ketol-acid reductoisomerase (341 aa)
       
    0.541
SUN_0101
Hypothetical protein (131 aa)
              0.508
SUN_0100
Glycosyl transferase family protein (365 aa)
              0.502
SUN_0099
Hypothetical protein (362 aa)
              0.502
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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