STRINGSTRING
SUN_0140 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_0140" - Hypothetical protein in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_0140Hypothetical protein (471 aa)    
Predicted Functional Partners:
SUN_0858
Signal transduction response regulator (755 aa)
 
  0.902
gyrB
DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner (773 aa)
              0.883
queF
7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) (125 aa)
              0.871
SUN_1205
Signal transduction response regulator (409 aa)
 
  0.812
SUN_1050
Hypothetical protein (370 aa)
 
  0.812
SUN_0838
Hypothetical protein (392 aa)
 
  0.812
SUN_0464
Hypothetical protein (607 aa)
 
  0.759
SUN_2424
Hypothetical protein (349 aa)
   
          0.701
SUN_2168
Signal transduction sensor histidine kinase (173 aa)
 
 
  0.662
SUN_0624
Signal transduction sensor histidine kinase (173 aa)
 
 
  0.662
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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