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STRINGSTRING
SUN_0140 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_0140" - Uncharacterized protein in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_0140Uncharacterized protein; Similar to signal transduction response regulator (EAL family protein) (471 aa)    
Predicted Functional Partners:
SUN_0464
annotation not available (607 aa)
 
  0.915
gyrB
DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner (773 aa)
     
      0.890
queF
NADPH-dependent 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1); Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily (125 aa)
   
        0.879
SUN_0858
Signal transduction response regulator (GGDEF family protein) (755 aa)
 
 
  0.875
SUN_1205
Signal transduction response regulator (GGDEF family protein) (409 aa)
 
  0.849
SUN_1050
Uncharacterized protein; Similar to signal transduction response regulator (GGDEF family protein) (370 aa)
 
  0.847
SUN_0838
Uncharacterized protein; Similar to signal transduction response regulator (GGDEF family protein) (392 aa)
 
  0.847
SUN_1857
Uncharacterized protein; Similar to two-component sensor histidine kinase/response regulator (1156 aa)
 
 
  0.743
SUN_2424
Uncharacterized protein; Probable gene remnant. Similar to the N- and C-terminal region of Desulfovibrio desulfuricans G20 ISPg7, transposase (438 aa) Dde_2849. This CDS appears to have a frameshift mutation following codon 230 (349 aa)
 
 
  0.737
SUN_1490
Uncharacterized protein; Similar to two-component response regulator (638 aa)
 
 
 
  0.727
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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