STRINGSTRING
SUN_0162 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_0162" - Sodium-driven multidrug efflux pump protein in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_0162Sodium-driven multidrug efflux pump protein (441 aa)    
Predicted Functional Partners:
SUN_1164
2-acylglycerophosphoethanolamine acyltransferase (1153 aa)
   
  0.839
SUN_0161
Hypothetical protein (107 aa)
              0.787
plsC
1-acyl-sn-glycerol-3-phosphate acyltransferase (236 aa)
     
  0.768
pgsA
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (189 aa)
       
  0.736
ssb
ssDNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism (165 aa)
       
  0.713
SUN_0163
Hypothetical protein (79 aa)
              0.657
SUN_1633
Hypothetical protein (128 aa)
 
          0.631
SUN_0160
2’-5’ RNA ligase; Hydrolyzes RNA 2’,3’-cyclic phosphodiester to an RNA 2’- phosphomonoester (166 aa)
              0.601
SUN_0943
RND efflux transporter (752 aa)
       
    0.535
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate (170 aa)
   
        0.477
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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