STRINGSTRING
ispA protein (Sulfurovum sp. NBC371) - STRING interaction network
"ispA" - Geranyltranstransferase in Sulfurovum sp. NBC371
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ispAGeranyltranstransferase (284 aa)    
Predicted Functional Partners:
ubiA
Prenyltransferase (296 aa)
   
 
  0.988
uppS
Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids (229 aa)
 
  0.985
SUN_0639
Polyprenyl synthetase (298 aa)
 
 
0.984
ispH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Converts 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP) (277 aa)
   
  0.950
SUN_0166
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate (659 aa)
   
   
  0.898
SUN_1522
UbiA prenyltransferase family protein (289 aa)
   
 
  0.879
SUN_0330
UbiA prenyltransferase family protein (289 aa)
   
 
  0.879
dxs
1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) (608 aa)
   
  0.835
SUN_1164
2-acylglycerophosphoethanolamine acyltransferase (1153 aa)
   
   
  0.738
thiJ
4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis protein (186 aa)
       
    0.714
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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