STRINGSTRING
SUN_0172 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_0172" - Aminotransferase in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_0172Aminotransferase (375 aa)    
Predicted Functional Partners:
SUN_0173
ATP phosphoribosyltransferase regulatory subunit (281 aa)
 
          0.902
SUN_0551
D-3-phosphoglycerate dehydrogenase (529 aa)
 
 
  0.895
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP (416 aa)
              0.882
SUN_0153
D-isomer specific 2-hydroxyacid dehydrogenase, catalytic component (315 aa)
   
 
  0.828
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (649 aa)
   
      0.813
SUN_1518
HAD family hydrolase (206 aa)
   
    0.766
SUN_0642
Phosphoserine phosphatase (207 aa)
   
    0.766
SUN_2092
Anaerobic glycerol-3-phosphate dehydrogenase subunit C (433 aa)
 
   
  0.760
SUN_0571
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate (320 aa)
   
 
  0.758
SUN_0572
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate (314 aa)
   
 
  0.757
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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