STRINGSTRING
SUN_0190 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_0190" - Hypothetical protein in Sulfurovum sp. NBC371
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_0190Hypothetical protein (273 aa)    
Predicted Functional Partners:
rplQ
50S ribosomal protein L17 (116 aa)
   
 
  0.740
rplV
50S ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity) (112 aa)
     
      0.687
rpe
Ribulose-phosphate 3-epimerase (213 aa)
   
 
  0.592
SUN_0191
Hypothetical protein (54 aa)
              0.585
polA
DNA polymerase I (898 aa)
   
   
  0.576
SUN_1645
Hydrogenase maturation protein HoxX (545 aa)
   
 
  0.570
SUN_1308
Metallophosphoesterase (294 aa)
   
        0.569
fmt
methionyl-tRNA formyltransferase; Modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by- (I) promoting its recognition by IF2 and (II) impairing its binding to EFTu-GTP (304 aa)
   
 
  0.557
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (649 aa)
   
   
  0.552
thiE
Thiamine-phosphate pyrophosphorylase (210 aa)
       
    0.533
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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