STRINGSTRING
SUN_0224 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_0224" - Aspartate aminotransferase in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_0224Aspartate aminotransferase (407 aa)    
Predicted Functional Partners:
SUN_0225
Homoserine dehydrogenase (425 aa)
   
  0.990
SUN_0571
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate (320 aa)
   
 
  0.984
SUN_0456
Aspartate kinase (401 aa)
   
  0.983
SUN_0515
Malate oxidoreductase (426 aa)
   
  0.983
SUN_0572
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate (314 aa)
   
 
  0.982
gltB
Glutamate synthase (NADPH), large chain (1471 aa)
   
  0.951
pheA
Chorismate mutase/prephenate dehydratase (352 aa)
 
 
  0.939
SUN_0222
RNA methyltransferase (234 aa)
   
        0.893
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan (248 aa)
       
  0.886
dapD
Tetrahydrodipicolinate N-succinyltransferase; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA (397 aa)
   
 
  0.874
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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