STRINGSTRING
SUN_0228 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_0228" - Formate dehydrogenase subunit alpha in Sulfurovum sp. NBC371
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_0228Formate dehydrogenase subunit alpha (703 aa)    
Predicted Functional Partners:
SUN_2227
FAD-dependent pyridine nucleotide-disulfide oxidoreductase (669 aa)
 
  0.995
SUN_0508
4Fe-4S ferredoxin (251 aa)
 
  0.971
SUN_1493
Molybdopterin oxidoreductase, iron sulfur subunit (535 aa)
  0.969
purU
Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) (278 aa)
       
    0.968
SUN_1652
Ni-Fe hydrogenase, small subunit (806 aa)
 
 
  0.947
SUN_0846
NADH-quinone oxidoreductase subunit D (547 aa)
   
  0.912
SUN_2226
NADH-quinone oxidoreductase subunit G (746 aa)
 
  0.888
SUN_1492
Ferredoxin--nitrite reductase (639 aa)
       
  0.886
SUN_0259
Ni-Fe hydrogenase, membrane subunit HycC/HyfB (627 aa)
   
  0.880
napG
Quinol dehydrogenase periplasmic component (277 aa)
   
 
  0.877
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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