STRINGSTRING
SUN_0232 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_0232" - phytanoyl-CoA dioxygenase in Sulfurovum sp. NBC371
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_0232phytanoyl-CoA dioxygenase (260 aa)    
Predicted Functional Partners:
SUN_0231
Hypothetical protein (113 aa)
              0.738
SUN_0230
Hypothetical protein (150 aa)
              0.738
bioA
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor (440 aa)
   
        0.651
bioD
Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring (210 aa)
     
        0.639
trxA
Thioredoxin (105 aa)
              0.569
SUN_1096
Hypothetical protein (148 aa)
 
          0.477
SUN_1179
Chloromuconate cycloisomerase (359 aa)
     
        0.463
SUN_1514
Hypothetical protein (183 aa)
   
          0.443
SUN_0229
Hypothetical protein (303 aa)
              0.405
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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