STRINGSTRING
trxB protein (Sulfurovum sp. NBC371) - STRING interaction network
"trxB" - Thioredoxin reductase in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trxBThioredoxin reductase (313 aa)    
Predicted Functional Partners:
trxA
Thioredoxin (105 aa)
 
  0.991
SUN_1284
AhpC/TSA family peroxiredoxin (232 aa)
   
 
  0.962
SUN_0752
AhpC/TSA family peroxiredoxin (198 aa)
   
 
  0.962
selD
Selenophosphate synthetase; Synthesizes selenophosphate from selenide and ATP (343 aa)
   
 
  0.903
SUN_0679
Thioredoxin (142 aa)
   
 
  0.896
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine (456 aa)
   
   
  0.891
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate (255 aa)
   
        0.882
SUN_0563
Thioredoxin reductase (317 aa)
   
 
  0.858
SUN_1299
Thioredoxin (125 aa)
 
 
  0.853
SUN_0900
Thioredoxin (162 aa)
   
 
  0.833
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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