STRINGSTRING
SUN_0249 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_0249" - Heme d1 biosynthesis protein NirF in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_0249Heme d1 biosynthesis protein NirF (366 aa)    
Predicted Functional Partners:
SUN_0245
Cytochrome cd1 nitrite reductase (571 aa)
 
   
  0.925
SUN_0294
AsnC family transcriptional regulator (330 aa)
 
   
  0.886
SUN_0291
Heme d1 biosynthesis protein NirJ (376 aa)
 
   
  0.879
SUN_0250
Hypothetical protein (138 aa)
              0.859
SUN_0243
Nitric-oxide reductase, small subunit (223 aa)
 
   
  0.851
SUN_0244
Nitric-oxide reductase, large subunit (481 aa)
 
   
  0.836
SUN_0246
Hypothetical protein (370 aa)
 
          0.725
SUN_1423
Hypothetical protein (454 aa)
 
        0.698
SUN_0158
Nitrous oxidase accessory protein NosD (409 aa)
 
        0.607
SUN_0248
K+ transport system, membrane component; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA (484 aa)
              0.593
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
Server load: low (16%) [HD]