STRINGSTRING
SUN_0283 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_0283" - Patatin in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_0283Patatin (300 aa)    
Predicted Functional Partners:
SUN_0284
Hypothetical protein (215 aa)
   
 
  0.879
SUN_0282
Hypothetical protein (614 aa)
              0.859
SUN_0281
Multidrug ABC transporter permease (360 aa)
   
        0.658
SUN_0280
Multidrug ABC transporter (372 aa)
   
        0.650
SUN_0279
Multidrug ABC transporter (546 aa)
   
        0.645
SUN_0277
Efflux system, membrane fusion protein (385 aa)
         
  0.635
SUN_0278
Hypothetical protein (384 aa)
              0.603
SUN_0275
RND efflux transporter (1016 aa)
              0.592
SUN_0273
Outer membrane efflux protein (415 aa)
              0.586
SUN_0276
Hypothetical protein (81 aa)
              0.585
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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