STRINGSTRING
SUN_0292 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_0292" - uroporphyrin-III C-methyltransferase in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_0292uroporphyrin-III C-methyltransferase (245 aa)    
Predicted Functional Partners:
SUN_0295
Hypothetical protein (188 aa)
 
  0.999
hemC
Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps (323 aa)
 
  0.996
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (346 aa)
       
  0.986
SUN_1892
uroporphyrinogen-III synthase (213 aa)
   
 
  0.983
hemB
Delta-aminolevulinic acid dehydratase (323 aa)
 
  0.963
SUN_1492
Ferredoxin--nitrite reductase (639 aa)
 
 
  0.956
SUN_0312
Ferredoxin--nitrite reductase (549 aa)
 
 
  0.949
SUN_0291
Heme d1 biosynthesis protein NirJ (376 aa)
   
   
  0.902
SUN_0290
Cytochrome c, class I (107 aa)
              0.862
hemL
Glutamate-1-semialdehyde aminotransferase (430 aa)
 
 
  0.829
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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