STRINGSTRING
SUN_0325 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_0325" - ABC transporter permease in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_0325ABC transporter permease (264 aa)    
Predicted Functional Partners:
SUN_0326
ABC transporter ATP-binding protein (408 aa)
 
  0.999
SUN_1738
Capsule polysaccharide export system ATP-binding protein (221 aa)
 
  0.986
SUN_0324
Mannose-1-phosphate guanylyltransferase (456 aa)
   
   
  0.955
SUN_0328
Glycosyl transferase family protein (972 aa)
 
   
  0.950
SUN_0327
Hypothetical protein (400 aa)
 
     
  0.945
SUN_0329
Hypothetical protein (322 aa)
 
          0.909
SUN_1737
Capsule polysaccharide export system inner membrane protein (364 aa)
   
 
  0.868
SUN_1735
Glycosyl transferase family protein (1335 aa)
 
   
  0.720
SUN_1549
TDP-4-oxo-6-deoxy-D-glucose transaminase (567 aa)
         
  0.687
SUN_0343
NAD-dependent epimerase/dehydratase (299 aa)
 
   
  0.645
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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