STRINGSTRING
SUN_0345 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_0345" - Glycosyl transferase family protein in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_0345Glycosyl transferase family protein (372 aa)    
Predicted Functional Partners:
SUN_0344
Glycosyl transferase family protein (384 aa)
 
       
0.899
SUN_0343
NAD-dependent epimerase/dehydratase (299 aa)
 
          0.888
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose (345 aa)
              0.839
SUN_1939
Glycosyl transferase family protein (438 aa)
 
     
  0.673
SUN_0328
Glycosyl transferase family protein (972 aa)
 
          0.635
SUN_0347
Hypothetical protein (177 aa)
              0.625
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction- alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (857 aa)
              0.625
SUN_0350
Penicillin-binding protein 1A (719 aa)
 
          0.600
SUN_0341
Type I secretion system ATPase (586 aa)
              0.547
SUN_0340
Type I secretion membrane fusion protein (446 aa)
              0.547
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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