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truB protein (Sulfurovum sp. NBC371) - STRING interaction network
"truB" - tRNA pseudouridine synthase B in Sulfurovum sp. NBC371
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
truBtRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (277 aa)    
Predicted Functional Partners:
rpsA
30S ribosomal protein S1 (552 aa)
   
 
  0.938
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP (513 aa)
     
   
  0.925
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs (240 aa)
 
  0.924
SUN_0384
ATP-dependent DNA helicase UvrD (688 aa)
   
        0.889
ksgA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (284 aa)
 
 
  0.882
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex (906 aa)
 
 
  0.870
ribF
Bifunctional riboflavin kinase/FMN adenylyltransferase (273 aa)
 
   
  0.846
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (333 aa)
   
 
  0.827
rplJ
50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors (161 aa)
   
 
  0.823
guaB
Inosine 5’-monophosphate dehydrogenase (481 aa)
   
 
  0.813
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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