STRINGSTRING
SUN_0385 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_0385" - LysR family transcriptional regulator in Sulfurovum sp. NBC371
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_0385LysR family transcriptional regulator (300 aa)    
Predicted Functional Partners:
SUN_0384
ATP-dependent DNA helicase UvrD (688 aa)
     
 
  0.685
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (277 aa)
              0.563
SUN_0858
Signal transduction response regulator (755 aa)
         
  0.557
clpS
ATP-dependent Clp protease, adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation (99 aa)
     
      0.531
cmoB
Hypothetical protein; Catalyzes carboxymethyl transfer from carboxy-S- adenosyl-L-methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5-carboxymethoxyuridine (cmo5U) at position 34 in tRNAs (301 aa)
   
 
  0.498
SUN_0015
Hypothetical protein (355 aa)
 
     
  0.482
gltB
Glutamate synthase (NADPH), large chain (1471 aa)
         
  0.476
SUN_0955
Hypothetical protein (325 aa)
     
   
  0.455
SUN_0925
AraC family transcriptional regulator (284 aa)
     
   
  0.455
SUN_0267
AraC family transcriptional regulator (304 aa)
     
   
  0.455
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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