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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
SUN_0398 protein (Sulfurovum sp. NBC371) - STRING interaction network
"SUN_0398" - annotation not available in Sulfurovum sp. NBC371
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN_0398annotation not available (385 aa)    
Predicted Functional Partners:
SUN_0388
annotation not available (306 aa)
       
  0.958
metH
annotation not available (1169 aa)
         
  0.947
SUN_1791
annotation not available (420 aa)
     
  0.932
SUN_1362
annotation not available (390 aa)
   
   
0.912
luxS
S-ribosylhomocysteine lyase; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD); Belongs to the LuxS family (169 aa)
       
  0.912
metE
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation (756 aa)
       
  0.910
SUN_0397
annotation not available (705 aa)
 
          0.906
SUN_0399
annotation not available (577 aa)
              0.845
pepD
annotation not available (423 aa)
       
  0.821
SUN_0225
annotation not available (425 aa)
       
  0.811
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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