STRINGSTRING
htpX protein (Sulfurovum sp. NBC371) - STRING interaction network
"htpX" - M48 family peptidase in Sulfurovum sp. NBC371
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
htpXM48 family peptidase (276 aa)    
Predicted Functional Partners:
SUN_0434
Hypothetical protein (135 aa)
              0.634
mqo
Malate-quinone oxidoreductase (507 aa)
   
        0.617
SUN_1683
Oligopeptidase A (649 aa)
     
 
  0.529
dnaK
Chaperone protein DnaK; Acts as a chaperone (627 aa)
   
 
  0.456
rpsE
30S ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy (152 aa)
       
 
  0.454
def
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions (174 aa)
         
  0.446
ftsH
Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (671 aa)
   
 
  0.443
hslU
ATP-dependent protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis (442 aa)
   
   
  0.434
rpe
Ribulose-phosphate 3-epimerase (213 aa)
   
        0.416
hemK
Protoporphyrinogen oxidase (282 aa)
         
  0.415
Your Current Organism:
Sulfurovum sp. NBC371
NCBI taxonomy Id: 387093
Other names: S. sp. NBC37-1, Sulfurovum, Sulfurovum Inagaki et al. 2004, Sulfurovum NBC37_1, Sulfurovum sp. NBC37-1, Sulfurovum sp. NBC371
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